Plant Protect. Sci., 2015, 51(4):200-207 | DOI: 10.17221/80/2014-PPS
Bioassay and phylogeny of five Iranian isolates of Cucumber mosaic virus from different hosts based on CP gene sequenceOriginal Paper
- 1 Department of Plant Protection, Faculty of Agricultural Sciences & Engineering, University College of Agriculture and Natural Resources, University of Tehran, Karaj, Iran
- 2 Department of Plant Protection, Faculty of Agriculture, Urmia University, Urmia, Iran
Using double-antibody sandwich enzyme-linked immunosorbent assay (DAS-ELISA), Cucumber mosaic virus (CMV) was detected in 31 out of 132 symptomatic leaf samples collected from different hosts of Urmia province of Iran, during 2011-2012. In biological assays, five different host isolates caused severe mosaic in Nicotiana species and Capsicum annum without significant difference in severity. Based on phylogenetic analysis of coat protein nucleotide and deduced amino acid sequence, two isolates were clustered into subgroup IA, while other three isolates were grouped into IB subgroup of CMV. All Urmian isolates shared a common MspI, and no EcoRI and BsuRI restriction sites. In contrast to S-IA isolates, the second MspI site was found at 473-476 position of only S-IB isolates, which could be used to differentiate two S-IA and S-IB subgroups. Here, we report the first case of Abutilon theophrasti infection, as a new reservoir weed host for CMV in the world.
Keywords: CMV; coat protein; genetic variation; phylogeny; symptomology; subgroup I
Published: December 31, 2015 Show citation
ACS | AIP | APA | ASA | Harvard | Chicago | Chicago Notes | IEEE | ISO690 | MLA | NLM | Turabian | Vancouver |
References
- Arafati N., Farzadfar S., Pourrahim R. (2013): Characterization of coat protein gene of Cucumber mosaic virus isolates in Iran. Iranian Journal of Biotechnology, 11: 109-114.
Go to original source...
- Bashir N.S., Kalhor M.R., Zarghani S.N. (2006): Detection, differentiation and phylogenetic analysis of Cucumber mosaic virus isolates from cucurbits in the Northwest region of Iran. Virus Genes, 32: 277-288.
Go to original source...
Go to PubMed...
- Bashir N.S, Nematollahi S., Torabi E. (2008): Cucumber mosaic virus subgroup IA frequently occurs in the Northwest Iran. Acta Virologica, 52: 237-242.
Go to PubMed...
- Berniak H., Kamińska M., Malinowski T. (2010): Cucumber mosaic virus group IA and II are represented among isolates from naturally infected lilies. European Journal of Plant Pathology, 127: 305-309.
Go to original source...
- Clark M.F., Adams A.N. (1977): Characteristics of microplate method of enzyme linked immunosorbent assay for the detection of plant viruses. Journal of General Virology, 34: 475-483.
Go to original source...
Go to PubMed...
- Deyong Z., Willingmann P., Heinze C., Adam G., Pfunder M., Fery B., Fery J.E. (2005): Differentiation of Cucumber mosaic virus isolates by hybridization to oligonucleotides in a microarray format. Journal of Virological Methods, 123: 101-108.
Go to original source...
Go to PubMed...
- Haase A., Ritcher J., Rabenstein F. (1989): Monoclonal antibodies for detection and serotyping of Cucumber mosaic virus. Journal of Phytopathology, 127: 129-136.
Go to original source...
- Hayakawa T., Mizukami M., Nakajima M., Suzuki M. (1989): Complete nucleotide sequence of RNA3 from Cucumber mosaic virus (CMV) strain O: comparative study of nucleotide sequences and amino acid sequences among CMV strains O, Q, D and Y. Journal of General Virology, 70: 499-504.
Go to original source...
Go to PubMed...
- Hellwald K.H., Glenewinkle D., Hauber S., Pfanzenk Z. (2000): Increased symptom severity in pepper plants after co-inoculation with two Cucumber mosaic virus subgroup I strains in comparison to single inoculations of the corresponding wildtype strains. Journal of Plant Disease and Protection, 107: 368-375.
- King A.M.Q., Adams M.J., Carstens E.B., Lefkowitz E.J. (2012): Virus Taxonomy, Ninth Report of the International Committee on Taxonomy of Viruses. San Diego, Elsevier Academic Press.
- Lin H.X., Rubio L., Smythe A.B., Falk B.W. (2004): Molecular population genetics of Cucumber mosaic virus in California: evidence for founder effects and reassortment. Journal of Virology, 78: 6666-6675.
Go to original source...
Go to PubMed...
- Nematollahi S., Bashir N.S., Rakhshandehroo F., Zamanizadeh H.R. (2012): Phylogenetic analysis of new isolates of Cucumber mosaic virus from Iran on the basis of different genomic regions. Plant Pathology Journal, 28: 381-389.
Go to original source...
- Nolasco G., de Blas C., Torres V., Ponz F. (1993): A method combining immunocapture and PCR amplification in a microtiter plate for the routine diagnosis of plant viruses and subviral pathogens. Journal of Virological Methods, 45: 201-218.
Go to original source...
Go to PubMed...
- Palukaitis P, Garcia-Arenal F. (2003): Cucumber mosaic virus. Description of Plant Viruses. Availabe at http://www.dpvweb.net/dpv/showdpv.php?dpvno=400
- Palukaitis P., Roossinck M.J., Dietzgen R.G., Francki R.I.B. (1992): Cucumber mosaic virus. Advances in Virus Research, 41: 281-348.
Go to original source...
Go to PubMed...
- Pares R.D., Gillings M.R., Gunn L.V. (1992): Differentiation of biologically distinct Cucumber mosaic virus isolates by PAGE of double-stranded RNA. Intervirology, 34: 23-29.
Go to original source...
Go to PubMed...
- Rizos H., Gunn L.V., Pares R.D., Gillings R.M. (1992): Differentiation of Cucumber mosaic virus isolates using the polymerase chain reaction. Journal of General Virology, 73: 2099-2103.
Go to original source...
Go to PubMed...
- Roossinck M.J. (2002): Evolutionary history of Cucumber mosaic virus deduced by phylogenetic analysis. Journal of Virology, 76: 3382-3387.
Go to original source...
Go to PubMed...
- Roossinck M.J., Zhang L., Hellwald K.H. (1999): Rearrangements in the 5' nontranslated region and phylogenetic analyses of Cucumber mosaic virus RNA 3 indicate radial evolution of three subgroups. Journal of Virology, 73: 6752-6758.
Go to original source...
Go to PubMed...
- Saitou N., Nei M. (1987): The neighbor-joining method: a new method for reconstructing phylogenetic trees. Molecular Biology and Evolution, 4: 406-425.
Go to PubMed...
- Tamura K., Peterson D., Peterson N., Stecher G., Nei M., Kumar S. (2011): MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Molecular Biology and Evolution, 28: 2731-2739.
Go to original source...
Go to PubMed...
- Wilson A.D., Halliwell R.S. (1985): Characterization and field studies of a Cucumber mosaic virus isolate from spinach in the Winter Garden area of Texas. Plant Disease, 69: 751-754.
Go to original source...
- Yu C., Wu J., Zhou X. (2005): Detection and subgrouping of Cucumber mosaic virus isolates by TAS-ELISA and immunocapture RT-PCR. Journal of Virological Methods, 123: 155-161.
Go to original source...
Go to PubMed...
- Zhang L., Hanada K., Palukaitis P. (1994): Mapping local and systemic symptom determinants of Cucumber mosaic cucumovirus in tobacco. Journal of General Virology, 75: 3185-3191. Recieved October 21, 2014
Go to original source...
Go to PubMed...
This is an open access article distributed under the terms of the Creative Commons Attribution-NonCommercial 4.0 International (CC BY NC 4.0), which permits non-comercial use, distribution, and reproduction in any medium, provided the original publication is properly cited. No use, distribution or reproduction is permitted which does not comply with these terms.